Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc25a53A2AF28 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc25a53A2AF28 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc25a53A2AF28 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.14■□□□□ 0.81
Slc25a53A2AF28 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc25a53A2AF28 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.14■□□□□ 0.81
Slc25a53A2AF28 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc25a53A2AF28 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc25a53A2AF28 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc25a53A2AF28 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc25a53A2AF28 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc25a53A2AF28 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc25a53A2AF28 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.13■□□□□ 0.81
Slc25a53A2AF28 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc25a53A2AF28 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Slc25a53A2AF28 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc25a53A2AF28 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc25a53A2AF28 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc25a53A2AF28 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc25a53A2AF28 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc25a53A2AF28 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Slc25a53A2AF28 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slc25a53A2AF28 Gm10420-201ENSMUST00000121713 882 ntBASIC20.12■□□□□ 0.81
Slc25a53A2AF28 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc25a53A2AF28 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Slc25a53A2AF28 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.11■□□□□ 0.81
Slc25a53A2AF28 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc25a53A2AF28 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc25a53A2AF28 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc25a53A2AF28 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Slc25a53A2AF28 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc25a53A2AF28 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc25a53A2AF28 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc25a53A2AF28 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc25a53A2AF28 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc25a53A2AF28 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc25a53A2AF28 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc25a53A2AF28 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc25a53A2AF28 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.09■□□□□ 0.81
Slc25a53A2AF28 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc25a53A2AF28 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc25a53A2AF28 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc25a53A2AF28 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc25a53A2AF28 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.08■□□□□ 0.81
Slc25a53A2AF28 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc25a53A2AF28 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc25a53A2AF28 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc25a53A2AF28 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc25a53A2AF28 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc25a53A2AF28 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc25a53A2AF28 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc25a53A2AF28 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc25a53A2AF28 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc25a53A2AF28 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc25a53A2AF28 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc25a53A2AF28 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc25a53A2AF28 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc25a53A2AF28 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.05■□□□□ 0.8
Slc25a53A2AF28 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.05■□□□□ 0.8
Slc25a53A2AF28 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Slc25a53A2AF28 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc25a53A2AF28 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc25a53A2AF28 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc25a53A2AF28 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.03■□□□□ 0.8
Slc25a53A2AF28 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc25a53A2AF28 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Slc25a53A2AF28 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc25a53A2AF28 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc25a53A2AF28 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc25a53A2AF28 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Slc25a53A2AF28 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc25a53A2AF28 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc25a53A2AF28 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc25a53A2AF28 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc25a53A2AF28 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Slc25a53A2AF28 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc25a53A2AF28 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc25a53A2AF28 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Slc25a53A2AF28 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20■□□□□ 0.79
Slc25a53A2AF28 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20■□□□□ 0.79
Slc25a53A2AF28 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc25a53A2AF28 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc25a53A2AF28 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Slc25a53A2AF28 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc25a53A2AF28 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Slc25a53A2AF28 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc25a53A2AF28 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc25a53A2AF28 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Slc25a53A2AF28 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc25a53A2AF28 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Slc25a53A2AF28 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Slc25a53A2AF28 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Slc25a53A2AF28 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc25a53A2AF28 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc25a53A2AF28 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc25a53A2AF28 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc25a53A2AF28 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Slc25a53A2AF28 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc25a53A2AF28 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc25a53A2AF28 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms