Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbc1A0A0A6YWV4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trbc1A0A0A6YWV4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbc1A0A0A6YWV4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.59■□□□□ 0.89
Trbc1A0A0A6YWV4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbc1A0A0A6YWV4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbc1A0A0A6YWV4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trbc1A0A0A6YWV4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbc1A0A0A6YWV4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trbc1A0A0A6YWV4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbc1A0A0A6YWV4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trbc1A0A0A6YWV4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trbc1A0A0A6YWV4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trbc1A0A0A6YWV4 Gm11687-201ENSMUST00000118911 886 ntBASIC20.58■□□□□ 0.89
Trbc1A0A0A6YWV4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Trbc1A0A0A6YWV4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
Trbc1A0A0A6YWV4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trbc1A0A0A6YWV4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Trbc1A0A0A6YWV4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbc1A0A0A6YWV4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbc1A0A0A6YWV4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbc1A0A0A6YWV4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbc1A0A0A6YWV4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbc1A0A0A6YWV4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Trbc1A0A0A6YWV4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trbc1A0A0A6YWV4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trbc1A0A0A6YWV4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Trbc1A0A0A6YWV4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbc1A0A0A6YWV4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbc1A0A0A6YWV4 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.55■□□□□ 0.88
Trbc1A0A0A6YWV4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Trbc1A0A0A6YWV4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trbc1A0A0A6YWV4 Gm16437-201ENSMUST00000025669 507 ntBASIC20.54■□□□□ 0.88
Trbc1A0A0A6YWV4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbc1A0A0A6YWV4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trbc1A0A0A6YWV4 Terc-201ENSMUST00000082862 423 ntBASIC20.54■□□□□ 0.88
Trbc1A0A0A6YWV4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbc1A0A0A6YWV4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbc1A0A0A6YWV4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trbc1A0A0A6YWV4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbc1A0A0A6YWV4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbc1A0A0A6YWV4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trbc1A0A0A6YWV4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trbc1A0A0A6YWV4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbc1A0A0A6YWV4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbc1A0A0A6YWV4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Trbc1A0A0A6YWV4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trbc1A0A0A6YWV4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.53■□□□□ 0.88
Trbc1A0A0A6YWV4 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.52■□□□□ 0.88
Trbc1A0A0A6YWV4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbc1A0A0A6YWV4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trbc1A0A0A6YWV4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trbc1A0A0A6YWV4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trbc1A0A0A6YWV4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbc1A0A0A6YWV4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbc1A0A0A6YWV4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.52■□□□□ 0.87
Trbc1A0A0A6YWV4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trbc1A0A0A6YWV4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbc1A0A0A6YWV4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbc1A0A0A6YWV4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.51■□□□□ 0.87
Trbc1A0A0A6YWV4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trbc1A0A0A6YWV4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbc1A0A0A6YWV4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbc1A0A0A6YWV4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.5■□□□□ 0.87
Trbc1A0A0A6YWV4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.5■□□□□ 0.87
Trbc1A0A0A6YWV4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trbc1A0A0A6YWV4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trbc1A0A0A6YWV4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbc1A0A0A6YWV4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbc1A0A0A6YWV4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbc1A0A0A6YWV4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbc1A0A0A6YWV4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbc1A0A0A6YWV4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbc1A0A0A6YWV4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trbc1A0A0A6YWV4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trbc1A0A0A6YWV4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbc1A0A0A6YWV4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbc1A0A0A6YWV4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trbc1A0A0A6YWV4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbc1A0A0A6YWV4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbc1A0A0A6YWV4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbc1A0A0A6YWV4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbc1A0A0A6YWV4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbc1A0A0A6YWV4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trbc1A0A0A6YWV4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trbc1A0A0A6YWV4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbc1A0A0A6YWV4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trbc1A0A0A6YWV4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.46■□□□□ 0.87
Trbc1A0A0A6YWV4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbc1A0A0A6YWV4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trbc1A0A0A6YWV4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.45■□□□□ 0.86
Trbc1A0A0A6YWV4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbc1A0A0A6YWV4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbc1A0A0A6YWV4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbc1A0A0A6YWV4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trbc1A0A0A6YWV4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbc1A0A0A6YWV4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbc1A0A0A6YWV4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trbc1A0A0A6YWV4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trbc1A0A0A6YWV4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms