Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.87■□□□□ 0.29
Ighv1-9A0A0A6YW37 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-9A0A0A6YW37 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-9A0A0A6YW37 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-9A0A0A6YW37 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-9A0A0A6YW37 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-9A0A0A6YW37 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-9A0A0A6YW37 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-9A0A0A6YW37 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-9A0A0A6YW37 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-9A0A0A6YW37 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ighv1-9A0A0A6YW37 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-9A0A0A6YW37 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ighv1-9A0A0A6YW37 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ighv1-9A0A0A6YW37 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-9A0A0A6YW37 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ighv1-9A0A0A6YW37 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ighv1-9A0A0A6YW37 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ighv1-9A0A0A6YW37 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-9A0A0A6YW37 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-9A0A0A6YW37 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ighv1-9A0A0A6YW37 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-9A0A0A6YW37 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ighv1-9A0A0A6YW37 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-9A0A0A6YW37 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-9A0A0A6YW37 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-9A0A0A6YW37 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-9A0A0A6YW37 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.82■□□□□ 0.28
Ighv1-9A0A0A6YW37 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-9A0A0A6YW37 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-9A0A0A6YW37 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ighv1-9A0A0A6YW37 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-9A0A0A6YW37 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-9A0A0A6YW37 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-9A0A0A6YW37 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-9A0A0A6YW37 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-9A0A0A6YW37 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Ighv1-9A0A0A6YW37 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-9A0A0A6YW37 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.8■□□□□ 0.28
Ighv1-9A0A0A6YW37 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ighv1-9A0A0A6YW37 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-9A0A0A6YW37 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-9A0A0A6YW37 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.79■□□□□ 0.28
Ighv1-9A0A0A6YW37 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-9A0A0A6YW37 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.79■□□□□ 0.28
Ighv1-9A0A0A6YW37 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Ighv1-9A0A0A6YW37 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-9A0A0A6YW37 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-9A0A0A6YW37 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-9A0A0A6YW37 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.78■□□□□ 0.28
Ighv1-9A0A0A6YW37 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-9A0A0A6YW37 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-9A0A0A6YW37 Gm4799-201ENSMUST00000095396 657 ntBASIC16.78■□□□□ 0.28
Ighv1-9A0A0A6YW37 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-9A0A0A6YW37 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-9A0A0A6YW37 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.77■□□□□ 0.28
Ighv1-9A0A0A6YW37 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-9A0A0A6YW37 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-9A0A0A6YW37 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ighv1-9A0A0A6YW37 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-9A0A0A6YW37 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-9A0A0A6YW37 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-9A0A0A6YW37 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Ighv1-9A0A0A6YW37 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-9A0A0A6YW37 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.76■□□□□ 0.27
Ighv1-9A0A0A6YW37 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-9A0A0A6YW37 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-9A0A0A6YW37 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-9A0A0A6YW37 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-9A0A0A6YW37 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.75■□□□□ 0.27
Ighv1-9A0A0A6YW37 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-9A0A0A6YW37 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-9A0A0A6YW37 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.75■□□□□ 0.27
Ighv1-9A0A0A6YW37 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-9A0A0A6YW37 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-9A0A0A6YW37 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-9A0A0A6YW37 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-9A0A0A6YW37 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ighv1-9A0A0A6YW37 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-9A0A0A6YW37 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-9A0A0A6YW37 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-9A0A0A6YW37 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-9A0A0A6YW37 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-9A0A0A6YW37 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-9A0A0A6YW37 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.73■□□□□ 0.27
Ighv1-9A0A0A6YW37 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-9A0A0A6YW37 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-9A0A0A6YW37 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.72■□□□□ 0.27
Ighv1-9A0A0A6YW37 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-9A0A0A6YW37 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms