Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Trav13-4-dv7A0A075B6C2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13-4-dv7A0A075B6C2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-4-dv7A0A075B6C2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms