Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav18A0A075B656 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav18A0A075B656 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav18A0A075B656 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav18A0A075B656 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav18A0A075B656 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav18A0A075B656 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav18A0A075B656 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trav18A0A075B656 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.35■□□□□ 0.53
Trav18A0A075B656 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav18A0A075B656 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav18A0A075B656 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trav18A0A075B656 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav18A0A075B656 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav18A0A075B656 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav18A0A075B656 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav18A0A075B656 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav18A0A075B656 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav18A0A075B656 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Trav18A0A075B656 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav18A0A075B656 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Trav18A0A075B656 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav18A0A075B656 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trav18A0A075B656 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav18A0A075B656 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.33■□□□□ 0.53
Trav18A0A075B656 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav18A0A075B656 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav18A0A075B656 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav18A0A075B656 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav18A0A075B656 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav18A0A075B656 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav18A0A075B656 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav18A0A075B656 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav18A0A075B656 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav18A0A075B656 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav18A0A075B656 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav18A0A075B656 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav18A0A075B656 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav18A0A075B656 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav18A0A075B656 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav18A0A075B656 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trav18A0A075B656 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav18A0A075B656 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trav18A0A075B656 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav18A0A075B656 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav18A0A075B656 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.31■□□□□ 0.52
Trav18A0A075B656 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav18A0A075B656 Gm8503-201ENSMUST00000118131 455 ntBASIC18.3■□□□□ 0.52
Trav18A0A075B656 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav18A0A075B656 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav18A0A075B656 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav18A0A075B656 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.29■□□□□ 0.52
Trav18A0A075B656 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav18A0A075B656 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav18A0A075B656 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav18A0A075B656 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav18A0A075B656 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav18A0A075B656 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav18A0A075B656 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav18A0A075B656 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav18A0A075B656 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.28■□□□□ 0.52
Trav18A0A075B656 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trav18A0A075B656 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav18A0A075B656 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav18A0A075B656 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav18A0A075B656 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav18A0A075B656 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trav18A0A075B656 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.27■□□□□ 0.51
Trav18A0A075B656 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav18A0A075B656 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav18A0A075B656 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav18A0A075B656 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
Trav18A0A075B656 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav18A0A075B656 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.26■□□□□ 0.51
Trav18A0A075B656 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav18A0A075B656 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav18A0A075B656 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav18A0A075B656 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav18A0A075B656 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav18A0A075B656 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav18A0A075B656 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav18A0A075B656 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trav18A0A075B656 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav18A0A075B656 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav18A0A075B656 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav18A0A075B656 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav18A0A075B656 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav18A0A075B656 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trav18A0A075B656 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav18A0A075B656 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav18A0A075B656 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav18A0A075B656 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav18A0A075B656 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Trav18A0A075B656 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav18A0A075B656 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav18A0A075B656 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav18A0A075B656 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav18A0A075B656 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trav18A0A075B656 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav18A0A075B656 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms