Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-1A0A075B601 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-1A0A075B601 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-1A0A075B601 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9-1A0A075B601 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9-1A0A075B601 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9-1A0A075B601 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.5■□□□□ 0.39
Trav9-1A0A075B601 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Trav9-1A0A075B601 Gm8503-201ENSMUST00000118131 455 ntBASIC17.5■□□□□ 0.39
Trav9-1A0A075B601 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.5■□□□□ 0.39
Trav9-1A0A075B601 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9-1A0A075B601 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9-1A0A075B601 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9-1A0A075B601 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9-1A0A075B601 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9-1A0A075B601 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9-1A0A075B601 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9-1A0A075B601 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav9-1A0A075B601 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Trav9-1A0A075B601 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trav9-1A0A075B601 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9-1A0A075B601 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav9-1A0A075B601 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9-1A0A075B601 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9-1A0A075B601 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9-1A0A075B601 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9-1A0A075B601 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9-1A0A075B601 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Trav9-1A0A075B601 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9-1A0A075B601 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9-1A0A075B601 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9-1A0A075B601 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9-1A0A075B601 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav9-1A0A075B601 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9-1A0A075B601 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav9-1A0A075B601 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9-1A0A075B601 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav9-1A0A075B601 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9-1A0A075B601 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Trav9-1A0A075B601 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9-1A0A075B601 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9-1A0A075B601 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9-1A0A075B601 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trav9-1A0A075B601 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9-1A0A075B601 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav9-1A0A075B601 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9-1A0A075B601 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trav9-1A0A075B601 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9-1A0A075B601 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.44■□□□□ 0.38
Trav9-1A0A075B601 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9-1A0A075B601 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9-1A0A075B601 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav9-1A0A075B601 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav9-1A0A075B601 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9-1A0A075B601 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9-1A0A075B601 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
Trav9-1A0A075B601 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.43■□□□□ 0.38
Trav9-1A0A075B601 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav9-1A0A075B601 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9-1A0A075B601 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trav9-1A0A075B601 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9-1A0A075B601 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9-1A0A075B601 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9-1A0A075B601 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9-1A0A075B601 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav9-1A0A075B601 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav9-1A0A075B601 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9-1A0A075B601 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Trav9-1A0A075B601 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav9-1A0A075B601 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9-1A0A075B601 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9-1A0A075B601 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav9-1A0A075B601 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9-1A0A075B601 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9-1A0A075B601 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9-1A0A075B601 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9-1A0A075B601 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trav9-1A0A075B601 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9-1A0A075B601 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.39■□□□□ 0.37
Trav9-1A0A075B601 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9-1A0A075B601 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav9-1A0A075B601 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav9-1A0A075B601 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav9-1A0A075B601 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav9-1A0A075B601 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9-1A0A075B601 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9-1A0A075B601 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9-1A0A075B601 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9-1A0A075B601 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9-1A0A075B601 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav9-1A0A075B601 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.36■□□□□ 0.37
Trav9-1A0A075B601 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9-1A0A075B601 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9-1A0A075B601 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9-1A0A075B601 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9-1A0A075B601 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9-1A0A075B601 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9-1A0A075B601 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav9-1A0A075B601 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9-1A0A075B601 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms