Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 MYC-209ENST00000641252 345 ntBASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 AC073111.5-205ENST00000641717 521 ntBASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 AC046158.3-201ENST00000624947 2558 ntBASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RCL1Q9Y2P8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.83□□□□□ -0.03
RCL1Q9Y2P8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RCL1Q9Y2P8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RCL1Q9Y2P8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.83□□□□□ -0.03
RCL1Q9Y2P8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RCL1Q9Y2P8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RCL1Q9Y2P8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RCL1Q9Y2P8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 KRT18P55-202ENST00000578578 1546 ntBASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 PRKY-204ENST00000533551 1019 ntBASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 AC092437.1-201ENST00000624794 1048 ntBASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
RCL1Q9Y2P8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 NBPF21P-201ENST00000425093 1451 ntBASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms