Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 AC106795.1-205ENST00000512851 1056 ntBASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 AF238378.1-201ENST00000526806 358 ntBASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCKAP1Q9Y2A7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 ANO7L1-203ENST00000602586 1720 ntBASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 KRT18P65-201ENST00000439811 1286 ntBASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 SLC25A6P4-201ENST00000586535 553 ntBASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 TP73-AS1-210ENST00000637775 1455 ntBASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 LINC01126-201ENST00000623515 1646 ntBASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.12■□□□□ 0.49
NCKAP1Q9Y2A7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 AC132008.2-207ENST00000454517 770 ntBASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 AC018445.3-201ENST00000624177 1945 ntBASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NCKAP1Q9Y2A7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms