Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ap4s1Q9WVL1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Ap4s1Q9WVL1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ap4s1Q9WVL1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Ap4s1Q9WVL1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ap4s1Q9WVL1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ap4s1Q9WVL1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ap4s1Q9WVL1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Ap4s1Q9WVL1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Gm20760-201ENSMUST00000179197 648 ntBASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ap4s1Q9WVL1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ap4s1Q9WVL1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms