Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX8Q9HC52 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX8Q9HC52 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CBX8Q9HC52 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.26■□□□□ 0.83
CBX8Q9HC52 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX8Q9HC52 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX8Q9HC52 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX8Q9HC52 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CBX8Q9HC52 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CBX8Q9HC52 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.25■□□□□ 0.83
CBX8Q9HC52 AL355802.2-201ENST00000402069 882 ntBASIC20.25■□□□□ 0.83
CBX8Q9HC52 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.25■□□□□ 0.83
CBX8Q9HC52 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
CBX8Q9HC52 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.25■□□□□ 0.83
CBX8Q9HC52 MIR3180-5-201ENST00000583743 153 ntBASIC20.25■□□□□ 0.83
CBX8Q9HC52 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.25■□□□□ 0.83
CBX8Q9HC52 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.25■□□□□ 0.83
CBX8Q9HC52 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX8Q9HC52 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CBX8Q9HC52 AC100803.2-201ENST00000562459 1963 ntBASIC20.25■□□□□ 0.83
CBX8Q9HC52 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.25■□□□□ 0.83
CBX8Q9HC52 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX8Q9HC52 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX8Q9HC52 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CBX8Q9HC52 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX8Q9HC52 AL121761.2-201ENST00000598007 1648 ntBASIC20.24■□□□□ 0.83
CBX8Q9HC52 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CBX8Q9HC52 AC133963.1-201ENST00000504166 1679 ntBASIC20.24■□□□□ 0.83
CBX8Q9HC52 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CBX8Q9HC52 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX8Q9HC52 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.24■□□□□ 0.83
CBX8Q9HC52 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX8Q9HC52 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CBX8Q9HC52 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.24■□□□□ 0.83
CBX8Q9HC52 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX8Q9HC52 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CBX8Q9HC52 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CBX8Q9HC52 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CBX8Q9HC52 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX8Q9HC52 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX8Q9HC52 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CBX8Q9HC52 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX8Q9HC52 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CBX8Q9HC52 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX8Q9HC52 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.23■□□□□ 0.83
CBX8Q9HC52 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX8Q9HC52 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX8Q9HC52 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CBX8Q9HC52 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CBX8Q9HC52 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.23■□□□□ 0.83
CBX8Q9HC52 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.23■□□□□ 0.83
CBX8Q9HC52 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.23■□□□□ 0.83
CBX8Q9HC52 MIR4674-201ENST00000582457 87 ntBASIC20.23■□□□□ 0.83
CBX8Q9HC52 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CBX8Q9HC52 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX8Q9HC52 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.23■□□□□ 0.83
CBX8Q9HC52 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX8Q9HC52 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX8Q9HC52 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CBX8Q9HC52 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX8Q9HC52 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX8Q9HC52 AL024508.2-201ENST00000607749 1894 ntBASIC20.22■□□□□ 0.83
CBX8Q9HC52 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX8Q9HC52 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 AL353807.1-201ENST00000427475 662 ntBASIC20.22■□□□□ 0.83
CBX8Q9HC52 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CBX8Q9HC52 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CBX8Q9HC52 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CBX8Q9HC52 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CBX8Q9HC52 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.22■□□□□ 0.83
CBX8Q9HC52 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CBX8Q9HC52 AC096733.2-201ENST00000609937 1394 ntBASIC20.21■□□□□ 0.83
CBX8Q9HC52 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CBX8Q9HC52 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.21■□□□□ 0.83
CBX8Q9HC52 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.21■□□□□ 0.83
CBX8Q9HC52 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CBX8Q9HC52 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms