Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC39Q96DD0 AL645608.8-201ENST00000606034 2086 ntBASIC18.3■□□□□ 0.52
LRRC39Q96DD0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 AC022898.2-201ENST00000616822 1312 ntBASIC18.3■□□□□ 0.52
LRRC39Q96DD0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 SEC1P-202ENST00000473944 940 ntBASIC18.3■□□□□ 0.52
LRRC39Q96DD0 AL512604.3-201ENST00000569583 964 ntBASIC18.3■□□□□ 0.52
LRRC39Q96DD0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 AC132938.6-201ENST00000623828 1655 ntBASIC18.3■□□□□ 0.52
LRRC39Q96DD0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC39Q96DD0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 MIR1238-201ENST00000408483 83 ntBASIC18.29■□□□□ 0.52
LRRC39Q96DD0 AL390955.1-201ENST00000428694 934 ntBASIC18.29■□□□□ 0.52
LRRC39Q96DD0 TSPY7P-201ENST00000431358 1114 ntBASIC18.29■□□□□ 0.52
LRRC39Q96DD0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 AC128688.1-201ENST00000487626 519 ntBASIC18.29■□□□□ 0.52
LRRC39Q96DD0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC39Q96DD0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.28■□□□□ 0.52
LRRC39Q96DD0 KRT17P2-201ENST00000300992 1314 ntBASIC18.28■□□□□ 0.52
LRRC39Q96DD0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC39Q96DD0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms