Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 AP003097.1-201ENST00000530657 1135 ntBASIC17.63■□□□□ 0.41
HIPK4Q8NE63 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 AC069544.1-201ENST00000609399 999 ntBASIC17.63■□□□□ 0.41
HIPK4Q8NE63 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 AC068587.9-201ENST00000641814 219 ntBASIC17.63■□□□□ 0.41
HIPK4Q8NE63 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK4Q8NE63 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 FLJ13224-201ENST00000313737 1514 ntBASIC17.62■□□□□ 0.41
HIPK4Q8NE63 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 AC008556.1-201ENST00000610908 2040 ntBASIC17.62■□□□□ 0.41
HIPK4Q8NE63 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 UBALD1-205ENST00000590891 2641 ntBASIC17.62■□□□□ 0.41
HIPK4Q8NE63 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 AL355802.2-201ENST00000402069 882 ntBASIC17.62■□□□□ 0.41
HIPK4Q8NE63 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 AC112777.1-201ENST00000540175 1423 ntBASIC17.62■□□□□ 0.41
HIPK4Q8NE63 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.62■□□□□ 0.41
HIPK4Q8NE63 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK4Q8NE63 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms