Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NME8Q8N427 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NME8Q8N427 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.92■□□□□ 0.78
NME8Q8N427 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NME8Q8N427 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NME8Q8N427 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NME8Q8N427 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.92■□□□□ 0.78
NME8Q8N427 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.92■□□□□ 0.78
NME8Q8N427 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
NME8Q8N427 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.92■□□□□ 0.78
NME8Q8N427 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.92■□□□□ 0.78
NME8Q8N427 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.92■□□□□ 0.78
NME8Q8N427 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.92■□□□□ 0.78
NME8Q8N427 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NME8Q8N427 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NME8Q8N427 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.92■□□□□ 0.78
NME8Q8N427 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.92■□□□□ 0.78
NME8Q8N427 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
NME8Q8N427 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NME8Q8N427 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.92■□□□□ 0.78
NME8Q8N427 TP73-AS1-210ENST00000637775 1455 ntBASIC19.92■□□□□ 0.78
NME8Q8N427 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NME8Q8N427 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NME8Q8N427 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NME8Q8N427 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
NME8Q8N427 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.91■□□□□ 0.78
NME8Q8N427 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NME8Q8N427 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.91■□□□□ 0.78
NME8Q8N427 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.91■□□□□ 0.78
NME8Q8N427 RCN1P2-201ENST00000398357 915 ntBASIC19.91■□□□□ 0.78
NME8Q8N427 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.91■□□□□ 0.78
NME8Q8N427 AC132008.2-207ENST00000454517 770 ntBASIC19.91■□□□□ 0.78
NME8Q8N427 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.91■□□□□ 0.78
NME8Q8N427 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.91■□□□□ 0.78
NME8Q8N427 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NME8Q8N427 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.91■□□□□ 0.78
NME8Q8N427 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.91■□□□□ 0.78
NME8Q8N427 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NME8Q8N427 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.91■□□□□ 0.78
NME8Q8N427 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NME8Q8N427 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NME8Q8N427 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NME8Q8N427 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.9■□□□□ 0.78
NME8Q8N427 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.9■□□□□ 0.78
NME8Q8N427 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NME8Q8N427 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
NME8Q8N427 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
NME8Q8N427 MRPL3P1-201ENST00000400109 1033 ntBASIC19.9■□□□□ 0.78
NME8Q8N427 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.9■□□□□ 0.78
NME8Q8N427 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.9■□□□□ 0.78
NME8Q8N427 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.9■□□□□ 0.78
NME8Q8N427 AL138831.2-201ENST00000606564 490 ntBASIC19.9■□□□□ 0.78
NME8Q8N427 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.9■□□□□ 0.78
NME8Q8N427 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NME8Q8N427 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 AC018445.3-201ENST00000624177 1945 ntBASIC19.9■□□□□ 0.78
NME8Q8N427 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NME8Q8N427 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.9■□□□□ 0.78
NME8Q8N427 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
NME8Q8N427 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
NME8Q8N427 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NME8Q8N427 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NME8Q8N427 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
NME8Q8N427 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.89■□□□□ 0.77
NME8Q8N427 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.89■□□□□ 0.77
NME8Q8N427 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.89■□□□□ 0.77
NME8Q8N427 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.89■□□□□ 0.77
NME8Q8N427 AC125634.1-201ENST00000438758 1403 ntBASIC19.89■□□□□ 0.77
NME8Q8N427 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.89■□□□□ 0.77
NME8Q8N427 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.89■□□□□ 0.77
NME8Q8N427 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.89■□□□□ 0.77
NME8Q8N427 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.89■□□□□ 0.77
NME8Q8N427 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.89■□□□□ 0.77
NME8Q8N427 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.89■□□□□ 0.77
NME8Q8N427 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.89■□□□□ 0.77
NME8Q8N427 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.89■□□□□ 0.77
NME8Q8N427 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NME8Q8N427 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms