Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Commd3Q63829 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Commd3Q63829 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Commd3Q63829 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Commd3Q63829 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Commd3Q63829 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Commd3Q63829 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Commd3Q63829 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Commd3Q63829 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Commd3Q63829 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Commd3Q63829 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.7□□□□□ -0.38
Commd3Q63829 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.7□□□□□ -0.38
Commd3Q63829 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Commd3Q63829 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Commd3Q63829 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.7□□□□□ -0.38
Commd3Q63829 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.7□□□□□ -0.38
Commd3Q63829 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.7□□□□□ -0.38
Commd3Q63829 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Commd3Q63829 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Commd3Q63829 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Commd3Q63829 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Commd3Q63829 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Commd3Q63829 Gm3375-201ENSMUST00000203929 796 ntBASIC12.69□□□□□ -0.38
Commd3Q63829 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.69□□□□□ -0.38
Commd3Q63829 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.69□□□□□ -0.38
Commd3Q63829 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Commd3Q63829 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Commd3Q63829 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Commd3Q63829 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Commd3Q63829 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.69□□□□□ -0.38
Commd3Q63829 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Commd3Q63829 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.68□□□□□ -0.38
Commd3Q63829 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Commd3Q63829 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 Gm12527-201ENSMUST00000117967 564 ntBASIC12.68□□□□□ -0.38
Commd3Q63829 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Commd3Q63829 Gm7370-201ENSMUST00000219471 767 ntBASIC12.68□□□□□ -0.38
Commd3Q63829 Odf3b-204ENSMUST00000227834 930 ntBASIC12.68□□□□□ -0.38
Commd3Q63829 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Commd3Q63829 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Commd3Q63829 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.68□□□□□ -0.38
Commd3Q63829 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.68□□□□□ -0.38
Commd3Q63829 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Commd3Q63829 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Commd3Q63829 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Commd3Q63829 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms