Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL13A1Q5TAT6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 AC133561.1-201ENST00000568600 2415 ntBASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 AL355306.1-201ENST00000415580 579 ntBASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 AL671277.1-201ENST00000429656 993 ntBASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 AC103810.3-201ENST00000583567 96 ntBASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 AC099568.2-201ENST00000609194 695 ntBASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL13A1Q5TAT6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 AC079140.1-201ENST00000508039 487 ntBASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 KRT8P23-201ENST00000560090 1207 ntBASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 RN7SL219P-201ENST00000582872 296 ntBASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL13A1Q5TAT6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 GOLGA2P4-201ENST00000441462 777 ntBASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 RN7SL752P-201ENST00000463779 287 ntBASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 AC026150.2-201ENST00000564693 1156 ntBASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 AC244093.1-201ENST00000610837 814 ntBASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 AC020907.1-201ENST00000616460 1350 ntBASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.18■□□□□ 0.82
COL13A1Q5TAT6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL13A1Q5TAT6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms