Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RNFT1Q5M7Z0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNFT1Q5M7Z0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNFT1Q5M7Z0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNFT1Q5M7Z0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.28■□□□□ 0.2
RNFT1Q5M7Z0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 AL590627.1-203ENST00000421194 1026 ntBASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 KRT18P67-201ENST00000432816 1264 ntBASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 FGFR3P6-201ENST00000457012 610 ntBASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 AP001005.1-201ENST00000571755 1248 ntBASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 AC120114.3-201ENST00000611923 658 ntBASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 BX640515.1-201ENST00000617215 977 ntBASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 AL773604.1-201ENST00000617417 272 ntBASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNFT1Q5M7Z0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNFT1Q5M7Z0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 AL031284.1-201ENST00000419297 478 ntBASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 MTDHP3-201ENST00000594186 672 ntBASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 AC064862.7-201ENST00000604520 867 ntBASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNFT1Q5M7Z0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.25■□□□□ 0.19
RNFT1Q5M7Z0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms