Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HCFC1P51610 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC1P51610 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.75■□□□□ 0.11
HCFC1P51610 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC1P51610 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HCFC1P51610 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 AC007967.2-201ENST00000432613 625 ntBASIC15.75■□□□□ 0.11
HCFC1P51610 AC068472.1-201ENST00000474589 881 ntBASIC15.75■□□□□ 0.11
HCFC1P51610 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.75■□□□□ 0.11
HCFC1P51610 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.75■□□□□ 0.11
HCFC1P51610 MTDHP4-201ENST00000600287 670 ntBASIC15.75■□□□□ 0.11
HCFC1P51610 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.75■□□□□ 0.11
HCFC1P51610 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC1P51610 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC1P51610 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC1P51610 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 AL049812.1-201ENST00000432563 2267 ntBASIC15.75■□□□□ 0.11
HCFC1P51610 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.75■□□□□ 0.11
HCFC1P51610 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC1P51610 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 MED15P5-201ENST00000423150 992 ntBASIC15.75■□□□□ 0.11
HCFC1P51610 AC004832.2-201ENST00000426397 482 ntBASIC15.75■□□□□ 0.11
HCFC1P51610 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC1P51610 MTCL1P1-201ENST00000446207 792 ntBASIC15.75■□□□□ 0.11
HCFC1P51610 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.75■□□□□ 0.11
HCFC1P51610 AC092910.1-201ENST00000482027 1129 ntBASIC15.75■□□□□ 0.11
HCFC1P51610 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.75■□□□□ 0.11
HCFC1P51610 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 AC011467.2-201ENST00000598425 242 ntBASIC15.75■□□□□ 0.11
HCFC1P51610 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC1P51610 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HCFC1P51610 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 NEFHP1-201ENST00000412845 2629 ntBASIC15.74■□□□□ 0.11
HCFC1P51610 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.74■□□□□ 0.11
HCFC1P51610 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.74■□□□□ 0.11
HCFC1P51610 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.74■□□□□ 0.11
HCFC1P51610 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.74■□□□□ 0.11
HCFC1P51610 AC092183.1-201ENST00000469884 875 ntBASIC15.74■□□□□ 0.11
HCFC1P51610 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.74■□□□□ 0.11
HCFC1P51610 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.74■□□□□ 0.11
HCFC1P51610 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.74■□□□□ 0.11
HCFC1P51610 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.74■□□□□ 0.11
HCFC1P51610 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.74■□□□□ 0.11
HCFC1P51610 AL356488.2-201ENST00000602755 427 ntBASIC15.74■□□□□ 0.11
HCFC1P51610 AC009154.2-201ENST00000621177 724 ntBASIC15.74■□□□□ 0.11
HCFC1P51610 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.74■□□□□ 0.11
HCFC1P51610 AC009102.3-201ENST00000623118 1491 ntBASIC15.74■□□□□ 0.11
HCFC1P51610 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.74■□□□□ 0.11
HCFC1P51610 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC1P51610 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HCFC1P51610 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.73■□□□□ 0.11
HCFC1P51610 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HCFC1P51610 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.73■□□□□ 0.11
HCFC1P51610 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 AL161938.1-201ENST00000569833 2180 ntBASIC15.73■□□□□ 0.11
HCFC1P51610 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC1P51610 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 AL356309.3-201ENST00000624132 1934 ntBASIC15.73■□□□□ 0.11
HCFC1P51610 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.73■□□□□ 0.11
HCFC1P51610 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.73■□□□□ 0.11
HCFC1P51610 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC1P51610 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms