Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21■□□□□ 0.95
CTDNEP1O95476 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTDNEP1O95476 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CTDNEP1O95476 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.99■□□□□ 0.95
CTDNEP1O95476 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.99■□□□□ 0.95
CTDNEP1O95476 HBZP1-201ENST00000354915 429 ntBASIC20.99■□□□□ 0.95
CTDNEP1O95476 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.99■□□□□ 0.95
CTDNEP1O95476 AK4P3-201ENST00000418260 669 ntBASIC20.99■□□□□ 0.95
CTDNEP1O95476 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 AL359075.1-203ENST00000462729 1002 ntBASIC20.99■□□□□ 0.95
CTDNEP1O95476 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.99■□□□□ 0.95
CTDNEP1O95476 RN7SL850P-201ENST00000579959 291 ntBASIC20.99■□□□□ 0.95
CTDNEP1O95476 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CTDNEP1O95476 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.99■□□□□ 0.95
CTDNEP1O95476 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CTDNEP1O95476 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.99■□□□□ 0.95
CTDNEP1O95476 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTDNEP1O95476 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CTDNEP1O95476 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.98■□□□□ 0.95
CTDNEP1O95476 AC004263.2-201ENST00000617183 678 ntBASIC20.98■□□□□ 0.95
CTDNEP1O95476 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.98■□□□□ 0.95
CTDNEP1O95476 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.98■□□□□ 0.95
CTDNEP1O95476 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CTDNEP1O95476 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTDNEP1O95476 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CTDNEP1O95476 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 MIR662-201ENST00000384847 95 ntBASIC20.97■□□□□ 0.95
CTDNEP1O95476 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 VENTXP5-201ENST00000523979 775 ntBASIC20.97■□□□□ 0.95
CTDNEP1O95476 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.97■□□□□ 0.95
CTDNEP1O95476 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTDNEP1O95476 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTDNEP1O95476 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.96■□□□□ 0.95
CTDNEP1O95476 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTDNEP1O95476 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTDNEP1O95476 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms