Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC8.03□□□□□ -1.12
USH2AO75445 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC8.03□□□□□ -1.12
USH2AO75445 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USH2AO75445 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
USH2AO75445 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USH2AO75445 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USH2AO75445 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
USH2AO75445 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USH2AO75445 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USH2AO75445 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USH2AO75445 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USH2AO75445 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USH2AO75445 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USH2AO75445 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
USH2AO75445 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC8.03□□□□□ -1.12
USH2AO75445 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC8.03□□□□□ -1.12
USH2AO75445 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC8.03□□□□□ -1.12
USH2AO75445 SPDYE22P-201ENST00000582158 798 ntBASIC8.03□□□□□ -1.12
USH2AO75445 AC006557.2-201ENST00000592985 1240 ntBASIC8.03□□□□□ -1.12
USH2AO75445 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC8.03□□□□□ -1.12
USH2AO75445 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
USH2AO75445 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC8.02□□□□□ -1.12
USH2AO75445 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
USH2AO75445 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.12
USH2AO75445 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
USH2AO75445 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
USH2AO75445 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
USH2AO75445 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC8.02□□□□□ -1.12
USH2AO75445 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC8.02□□□□□ -1.12
USH2AO75445 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 TREML5P-201ENST00000421694 576 ntBASIC8.02□□□□□ -1.13
USH2AO75445 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC8.02□□□□□ -1.13
USH2AO75445 PACS1-203ENST00000524815 628 ntTSL 4 BASIC8.02□□□□□ -1.13
USH2AO75445 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC8.02□□□□□ -1.13
USH2AO75445 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
USH2AO75445 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 ENSA-205ENST00000361532 792 ntTSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC8.02□□□□□ -1.13
USH2AO75445 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC8.02□□□□□ -1.13
USH2AO75445 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 CYP51A1P1-201ENST00000492267 1507 ntBASIC8.02□□□□□ -1.13
USH2AO75445 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC8.02□□□□□ -1.13
USH2AO75445 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
USH2AO75445 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC8.02□□□□□ -1.13
USH2AO75445 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC8.02□□□□□ -1.13
USH2AO75445 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC8.02□□□□□ -1.13
USH2AO75445 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC8.02□□□□□ -1.13
USH2AO75445 AL662799.1-202ENST00000614205 422 ntBASIC8.02□□□□□ -1.13
USH2AO75445 BID-212ENST00000614949 1988 ntTSL 5 BASIC8.02□□□□□ -1.13
USH2AO75445 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC8.02□□□□□ -1.13
USH2AO75445 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USH2AO75445 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC8.01□□□□□ -1.13
USH2AO75445 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
USH2AO75445 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC8.01□□□□□ -1.13
USH2AO75445 AC027307.3-201ENST00000594262 1100 ntBASIC8.01□□□□□ -1.13
USH2AO75445 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC8.01□□□□□ -1.13
USH2AO75445 TDG-209ENST00000544861 1387 ntTSL 2 BASIC8.01□□□□□ -1.13
USH2AO75445 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms