Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 SLC25A1P2-201ENST00000430693 912 ntBASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 AC112497.1-201ENST00000624824 639 ntBASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC52A3Q9NQ40 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 TSPY17P-201ENST00000450329 467 ntBASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 AC233702.5-201ENST00000584107 538 ntBASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 AC011676.5-201ENST00000624864 2660 ntBASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC52A3Q9NQ40 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 LINC00167-201ENST00000530583 1419 ntBASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 KRT18P29-201ENST00000397031 1267 ntBASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 AC009065.1-201ENST00000564055 1225 ntBASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 ITM2C-210ENST00000620962 501 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms