Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 ZNF259P1-201ENST00000407656 1365 ntBASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 AC092183.1-201ENST00000469884 875 ntBASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 AC073648.2-201ENST00000510116 352 ntBASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC46A1Q96NT5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 AC087289.5-201ENST00000586076 3175 ntBASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 AL163051.1-201ENST00000569214 1512 ntBASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 RPS2P28-201ENST00000314255 741 ntBASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 RCN1P2-201ENST00000398357 915 ntBASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 SCARNA2-201ENST00000458748 420 ntBASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 AL049840.3-201ENST00000602669 611 ntBASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 FAM215A-202ENST00000632077 792 ntBASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC46A1Q96NT5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 MIR940-201ENST00000401276 94 ntBASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 RBM17P3-201ENST00000417687 1192 ntBASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 KRT18P41-201ENST00000518924 1277 ntBASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC46A1Q96NT5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 ANO7L1-203ENST00000602586 1720 ntBASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 FAM220CP-201ENST00000395253 831 ntBASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 BX842568.4-201ENST00000421222 227 ntBASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 FGFR3P6-201ENST00000457012 610 ntBASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 AC113404.2-201ENST00000507884 177 ntBASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 AC008687.5-201ENST00000593746 558 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms