Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX1Q92499 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.34■□□□□ 0.69
DDX1Q92499 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
DDX1Q92499 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.34■□□□□ 0.69
DDX1Q92499 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.34■□□□□ 0.69
DDX1Q92499 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
DDX1Q92499 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX1Q92499 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
DDX1Q92499 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX1Q92499 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
DDX1Q92499 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.33■□□□□ 0.69
DDX1Q92499 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
DDX1Q92499 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.33■□□□□ 0.69
DDX1Q92499 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX1Q92499 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX1Q92499 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.33■□□□□ 0.69
DDX1Q92499 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
DDX1Q92499 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
DDX1Q92499 SPDYE15P-201ENST00000424157 909 ntBASIC19.33■□□□□ 0.68
DDX1Q92499 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
DDX1Q92499 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX1Q92499 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.33■□□□□ 0.68
DDX1Q92499 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.33■□□□□ 0.68
DDX1Q92499 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX1Q92499 AC140113.3-201ENST00000605663 199 ntBASIC19.33■□□□□ 0.68
DDX1Q92499 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDX1Q92499 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX1Q92499 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX1Q92499 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX1Q92499 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX1Q92499 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.33■□□□□ 0.68
DDX1Q92499 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX1Q92499 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
DDX1Q92499 PCDHB18P-201ENST00000524813 2368 ntBASIC19.33■□□□□ 0.68
DDX1Q92499 LINC00167-201ENST00000530583 1419 ntBASIC19.33■□□□□ 0.68
DDX1Q92499 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX1Q92499 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX1Q92499 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX1Q92499 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.32■□□□□ 0.68
DDX1Q92499 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX1Q92499 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX1Q92499 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX1Q92499 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
DDX1Q92499 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX1Q92499 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.32■□□□□ 0.68
DDX1Q92499 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX1Q92499 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
DDX1Q92499 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.32■□□□□ 0.68
DDX1Q92499 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
DDX1Q92499 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX1Q92499 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
DDX1Q92499 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
DDX1Q92499 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
DDX1Q92499 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.31■□□□□ 0.68
DDX1Q92499 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DDX1Q92499 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX1Q92499 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 AC134043.2-201ENST00000624206 2238 ntBASIC19.31■□□□□ 0.68
DDX1Q92499 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DDX1Q92499 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
DDX1Q92499 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX1Q92499 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.31■□□□□ 0.68
DDX1Q92499 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 AC034232.1-201ENST00000506026 1064 ntBASIC19.31■□□□□ 0.68
DDX1Q92499 DUTP2-201ENST00000519164 463 ntBASIC19.31■□□□□ 0.68
DDX1Q92499 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.31■□□□□ 0.68
DDX1Q92499 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms