Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 RHOQP3-201ENST00000437982 621 ntBASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 NCF1C-201ENST00000438382 1427 ntBASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AC015911.4-201ENST00000588022 1070 ntBASIC12.15□□□□□ -0.46
ALMS1Q8TCU4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ALMS1Q8TCU4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.15□□□□□ -0.47
ALMS1Q8TCU4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.15□□□□□ -0.47
ALMS1Q8TCU4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.15□□□□□ -0.47
ALMS1Q8TCU4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.15□□□□□ -0.47
ALMS1Q8TCU4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 AC112907.3-201ENST00000577781 2400 ntBASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ALMS1Q8TCU4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 AC051619.7-201ENST00000568314 623 ntBASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 AC132938.6-201ENST00000623828 1655 ntBASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 AC010460.3-201ENST00000511359 1579 ntBASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 AC002472.2-201ENST00000442739 958 ntBASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 PRYP5-201ENST00000451909 266 ntBASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 AC093520.2-201ENST00000561830 333 ntBASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 AC125437.2-201ENST00000625180 2167 ntBASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 LINC01006-201ENST00000333319 2292 ntBASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ALMS1Q8TCU4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 LINC01126-201ENST00000623515 1646 ntBASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms