Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.28■■□□□ 1.16
RTL9Q8NET4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTL9Q8NET4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTL9Q8NET4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.28■■□□□ 1.16
RTL9Q8NET4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTL9Q8NET4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTL9Q8NET4 AC126763.1-201ENST00000552015 2118 ntBASIC22.28■■□□□ 1.16
RTL9Q8NET4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTL9Q8NET4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RTL9Q8NET4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC22.27■■□□□ 1.16
RTL9Q8NET4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.27■■□□□ 1.16
RTL9Q8NET4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 ABCD1P5-201ENST00000445663 754 ntBASIC22.27■■□□□ 1.16
RTL9Q8NET4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RTL9Q8NET4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.27■■□□□ 1.16
RTL9Q8NET4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.27■■□□□ 1.16
RTL9Q8NET4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC22.27■■□□□ 1.16
RTL9Q8NET4 MIR7706-201ENST00000613747 67 ntBASIC22.27■■□□□ 1.16
RTL9Q8NET4 AC117500.6-201ENST00000624871 588 ntBASIC22.27■■□□□ 1.16
RTL9Q8NET4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 AC097374.2-201ENST00000618617 1306 ntBASIC22.27■■□□□ 1.16
RTL9Q8NET4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.27■■□□□ 1.16
RTL9Q8NET4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RTL9Q8NET4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 PAN3-AS1-201ENST00000563843 1351 ntBASIC22.27■■□□□ 1.16
RTL9Q8NET4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.27■■□□□ 1.16
RTL9Q8NET4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTL9Q8NET4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
RTL9Q8NET4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL9Q8NET4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL9Q8NET4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 AF186996.4-201ENST00000467186 377 ntBASIC22.26■■□□□ 1.15
RTL9Q8NET4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 AL049840.3-201ENST00000602669 611 ntBASIC22.26■■□□□ 1.15
RTL9Q8NET4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL9Q8NET4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL9Q8NET4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL9Q8NET4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL9Q8NET4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 AP005117.1-201ENST00000584346 1413 ntBASIC22.26■■□□□ 1.15
RTL9Q8NET4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL9Q8NET4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL9Q8NET4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL9Q8NET4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RTL9Q8NET4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL9Q8NET4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 KRT18P13-201ENST00000400056 1290 ntBASIC22.25■■□□□ 1.15
RTL9Q8NET4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTL9Q8NET4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.25■■□□□ 1.15
RTL9Q8NET4 MTDHP3-201ENST00000594186 672 ntBASIC22.25■■□□□ 1.15
RTL9Q8NET4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTL9Q8NET4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTL9Q8NET4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTL9Q8NET4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTL9Q8NET4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTL9Q8NET4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTL9Q8NET4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.24■■□□□ 1.15
RTL9Q8NET4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms