Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCRAQ6ISU1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 AL589182.2-201ENST00000619332 1049 ntBASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 AF228730.6-201ENST00000641497 218 ntBASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 AC084121.3-201ENST00000641716 218 ntBASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 AC105233.6-201ENST00000642093 218 ntBASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCRAQ6ISU1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 AC063926.2-201ENST00000623766 1308 ntBASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 AC007967.3-201ENST00000434308 558 ntBASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 AC005498.2-205ENST00000593218 784 ntBASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 SDHAP2-201ENST00000455183 2001 ntBASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCRAQ6ISU1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 ELK2BP-201ENST00000415014 1224 ntBASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 ACTG1P14-201ENST00000446382 1122 ntBASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 AC069262.1-201ENST00000539058 672 ntBASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 PDPK2P-202ENST00000562415 1191 ntBASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 AC004835.2-201ENST00000603762 682 ntBASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 AC004706.3-202ENST00000621574 984 ntBASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCRAQ6ISU1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCRAQ6ISU1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PTCRAQ6ISU1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCRAQ6ISU1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCRAQ6ISU1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCRAQ6ISU1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCRAQ6ISU1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCRAQ6ISU1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCRAQ6ISU1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms