Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.89■□□□□ 0.29
CD47Q08722 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 PRORSD1P-201ENST00000295112 541 ntBASIC16.89■□□□□ 0.29
CD47Q08722 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.89■□□□□ 0.29
CD47Q08722 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.89■□□□□ 0.29
CD47Q08722 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.89■□□□□ 0.29
CD47Q08722 AL158047.1-201ENST00000445918 881 ntBASIC16.89■□□□□ 0.29
CD47Q08722 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CD47Q08722 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.89■□□□□ 0.29
CD47Q08722 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.89■□□□□ 0.29
CD47Q08722 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 AC142381.4-202ENST00000563973 229 ntBASIC16.89■□□□□ 0.29
CD47Q08722 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CD47Q08722 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.89■□□□□ 0.29
CD47Q08722 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.89■□□□□ 0.29
CD47Q08722 AC073195.1-201ENST00000607241 877 ntBASIC16.89■□□□□ 0.29
CD47Q08722 AL031985.4-201ENST00000642138 673 ntBASIC16.89■□□□□ 0.29
CD47Q08722 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.89■□□□□ 0.29
CD47Q08722 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.89■□□□□ 0.29
CD47Q08722 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 AL096828.2-201ENST00000567259 1965 ntBASIC16.89■□□□□ 0.29
CD47Q08722 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CD47Q08722 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD47Q08722 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CD47Q08722 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CD47Q08722 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.88■□□□□ 0.29
CD47Q08722 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CD47Q08722 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CD47Q08722 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.88■□□□□ 0.29
CD47Q08722 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.88■□□□□ 0.29
CD47Q08722 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.88■□□□□ 0.29
CD47Q08722 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CD47Q08722 AC004951.3-201ENST00000418645 1148 ntBASIC16.88■□□□□ 0.29
CD47Q08722 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.88■□□□□ 0.29
CD47Q08722 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.88■□□□□ 0.29
CD47Q08722 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CD47Q08722 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CD47Q08722 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.88■□□□□ 0.29
CD47Q08722 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD47Q08722 KRT8P11-201ENST00000409686 1436 ntBASIC16.87■□□□□ 0.29
CD47Q08722 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD47Q08722 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.87■□□□□ 0.29
CD47Q08722 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD47Q08722 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CD47Q08722 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD47Q08722 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.87■□□□□ 0.29
CD47Q08722 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.87■□□□□ 0.29
CD47Q08722 AL023806.1-201ENST00000603994 1649 ntBASIC16.87■□□□□ 0.29
CD47Q08722 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CD47Q08722 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.87■□□□□ 0.29
CD47Q08722 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CD47Q08722 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.87■□□□□ 0.29
CD47Q08722 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms