Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
RPL39P62891 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.87□□□□□ -0.35
RPL39P62891 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RPL39P62891 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RPL39P62891 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.87□□□□□ -0.35
RPL39P62891 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RPL39P62891 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RPL39P62891 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.87□□□□□ -0.35
RPL39P62891 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.87□□□□□ -0.35
RPL39P62891 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RPL39P62891 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RPL39P62891 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RPL39P62891 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RPL39P62891 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
RPL39P62891 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.86□□□□□ -0.35
RPL39P62891 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.86□□□□□ -0.35
RPL39P62891 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
RPL39P62891 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.86□□□□□ -0.35
RPL39P62891 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.86□□□□□ -0.35
RPL39P62891 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.86□□□□□ -0.35
RPL39P62891 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.86□□□□□ -0.35
RPL39P62891 GUSBP6-202ENST00000438529 1198 ntBASIC12.86□□□□□ -0.35
RPL39P62891 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.86□□□□□ -0.35
RPL39P62891 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.86□□□□□ -0.35
RPL39P62891 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.86□□□□□ -0.35
RPL39P62891 KRT18P41-201ENST00000518924 1277 ntBASIC12.86□□□□□ -0.35
RPL39P62891 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
RPL39P62891 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.86□□□□□ -0.35
RPL39P62891 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RPL39P62891 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.86□□□□□ -0.35
RPL39P62891 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.86□□□□□ -0.35
RPL39P62891 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RPL39P62891 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RPL39P62891 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.86□□□□□ -0.35
RPL39P62891 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
RPL39P62891 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.86□□□□□ -0.35
RPL39P62891 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RPL39P62891 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RPL39P62891 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.85□□□□□ -0.35
RPL39P62891 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RPL39P62891 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.85□□□□□ -0.35
RPL39P62891 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
RPL39P62891 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RPL39P62891 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.85□□□□□ -0.35
RPL39P62891 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.85□□□□□ -0.35
RPL39P62891 POM121L13P-201ENST00000422362 380 ntBASIC12.85□□□□□ -0.35
RPL39P62891 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RPL39P62891 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.85□□□□□ -0.35
RPL39P62891 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 IKBKGP1-201ENST00000612193 1073 ntBASIC12.85□□□□□ -0.35
RPL39P62891 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.85□□□□□ -0.35
RPL39P62891 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
RPL39P62891 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.85□□□□□ -0.35
RPL39P62891 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.85□□□□□ -0.35
RPL39P62891 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RPL39P62891 AC008894.3-201ENST00000624324 3103 ntBASIC12.85□□□□□ -0.35
RPL39P62891 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.85□□□□□ -0.35
RPL39P62891 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms