Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.71■□□□□ 0.91
COPB2P35606 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.71■□□□□ 0.91
COPB2P35606 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.71■□□□□ 0.91
COPB2P35606 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COPB2P35606 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COPB2P35606 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.71■□□□□ 0.91
COPB2P35606 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COPB2P35606 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 IL9RP2-201ENST00000423948 1312 ntBASIC20.71■□□□□ 0.91
COPB2P35606 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.71■□□□□ 0.91
COPB2P35606 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPB2P35606 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
COPB2P35606 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
COPB2P35606 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.7■□□□□ 0.91
COPB2P35606 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPB2P35606 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPB2P35606 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COPB2P35606 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
COPB2P35606 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPB2P35606 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPB2P35606 LINC00602-201ENST00000629776 2065 ntBASIC20.7■□□□□ 0.9
COPB2P35606 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPB2P35606 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPB2P35606 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.7■□□□□ 0.9
COPB2P35606 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.7■□□□□ 0.9
COPB2P35606 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.7■□□□□ 0.9
COPB2P35606 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.7■□□□□ 0.9
COPB2P35606 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COPB2P35606 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPB2P35606 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPB2P35606 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COPB2P35606 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.7■□□□□ 0.9
COPB2P35606 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPB2P35606 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPB2P35606 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.69■□□□□ 0.9
COPB2P35606 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
COPB2P35606 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COPB2P35606 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPB2P35606 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COPB2P35606 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPB2P35606 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COPB2P35606 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPB2P35606 RPS2P28-201ENST00000314255 741 ntBASIC20.69■□□□□ 0.9
COPB2P35606 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPB2P35606 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
COPB2P35606 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPB2P35606 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COPB2P35606 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.69■□□□□ 0.9
COPB2P35606 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.69■□□□□ 0.9
COPB2P35606 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.69■□□□□ 0.9
COPB2P35606 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.69■□□□□ 0.9
COPB2P35606 MTDHP3-201ENST00000594186 672 ntBASIC20.69■□□□□ 0.9
COPB2P35606 GPALPP1-207ENST00000611650 899 ntBASIC20.69■□□□□ 0.9
COPB2P35606 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPB2P35606 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.69■□□□□ 0.9
COPB2P35606 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPB2P35606 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPB2P35606 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COPB2P35606 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPB2P35606 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPB2P35606 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.69■□□□□ 0.9
COPB2P35606 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPB2P35606 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.68■□□□□ 0.9
COPB2P35606 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPB2P35606 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPB2P35606 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPB2P35606 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.68■□□□□ 0.9
COPB2P35606 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COPB2P35606 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
COPB2P35606 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPB2P35606 RNPS1P1-201ENST00000507437 918 ntBASIC20.68■□□□□ 0.9
COPB2P35606 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.68■□□□□ 0.9
COPB2P35606 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.68■□□□□ 0.9
COPB2P35606 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.68■□□□□ 0.9
COPB2P35606 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.68■□□□□ 0.9
COPB2P35606 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.68■□□□□ 0.9
COPB2P35606 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.68■□□□□ 0.9
COPB2P35606 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPB2P35606 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPB2P35606 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPB2P35606 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COPB2P35606 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
COPB2P35606 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.68■□□□□ 0.9
COPB2P35606 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPB2P35606 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COPB2P35606 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPB2P35606 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.67■□□□□ 0.9
COPB2P35606 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.67■□□□□ 0.9
COPB2P35606 LINC01126-201ENST00000623515 1646 ntBASIC20.67■□□□□ 0.9
COPB2P35606 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPB2P35606 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.67■□□□□ 0.9
COPB2P35606 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPB2P35606 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPB2P35606 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPB2P35606 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms