Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNGA1P29973 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNGA1P29973 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNGA1P29973 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.63■□□□□ 0.89
CNGA1P29973 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CNGA1P29973 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNGA1P29973 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CNGA1P29973 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.63■□□□□ 0.89
CNGA1P29973 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CNGA1P29973 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CNGA1P29973 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.63■□□□□ 0.89
CNGA1P29973 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNGA1P29973 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
CNGA1P29973 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNGA1P29973 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNGA1P29973 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CNGA1P29973 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CNGA1P29973 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNGA1P29973 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNGA1P29973 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CNGA1P29973 AC098818.2-201ENST00000564925 2320 ntBASIC20.62■□□□□ 0.89
CNGA1P29973 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA1P29973 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CNGA1P29973 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA1P29973 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA1P29973 FAM220CP-201ENST00000395253 831 ntBASIC20.62■□□□□ 0.89
CNGA1P29973 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.62■□□□□ 0.89
CNGA1P29973 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.62■□□□□ 0.89
CNGA1P29973 AL355877.3-201ENST00000622820 899 ntBASIC20.62■□□□□ 0.89
CNGA1P29973 FAM215A-202ENST00000632077 792 ntBASIC20.62■□□□□ 0.89
CNGA1P29973 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA1P29973 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CNGA1P29973 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA1P29973 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA1P29973 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.62■□□□□ 0.89
CNGA1P29973 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA1P29973 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA1P29973 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.62■□□□□ 0.89
CNGA1P29973 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNGA1P29973 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.61■□□□□ 0.89
CNGA1P29973 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 RPS2P28-201ENST00000314255 741 ntBASIC20.61■□□□□ 0.89
CNGA1P29973 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.61■□□□□ 0.89
CNGA1P29973 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.61■□□□□ 0.89
CNGA1P29973 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.61■□□□□ 0.89
CNGA1P29973 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.61■□□□□ 0.89
CNGA1P29973 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CNGA1P29973 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CNGA1P29973 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.61■□□□□ 0.89
CNGA1P29973 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 AC116407.3-201ENST00000623905 1129 ntBASIC20.61■□□□□ 0.89
CNGA1P29973 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.61■□□□□ 0.89
CNGA1P29973 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 BX323043.1-201ENST00000641006 1765 ntBASIC20.61■□□□□ 0.89
CNGA1P29973 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 TP73-AS1-210ENST00000637775 1455 ntBASIC20.61■□□□□ 0.89
CNGA1P29973 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 AC099343.3-201ENST00000605834 2503 ntBASIC20.61■□□□□ 0.89
CNGA1P29973 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNGA1P29973 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.61■□□□□ 0.89
CNGA1P29973 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA1P29973 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.6■□□□□ 0.89
CNGA1P29973 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CNGA1P29973 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CNGA1P29973 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA1P29973 AL163051.1-201ENST00000569214 1512 ntBASIC20.6■□□□□ 0.89
CNGA1P29973 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA1P29973 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CNGA1P29973 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.6■□□□□ 0.89
CNGA1P29973 HNRNPDP1-201ENST00000439535 754 ntBASIC20.6■□□□□ 0.89
CNGA1P29973 SCARNA2-201ENST00000458748 420 ntBASIC20.6■□□□□ 0.89
CNGA1P29973 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.6■□□□□ 0.89
CNGA1P29973 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.6■□□□□ 0.89
CNGA1P29973 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.6■□□□□ 0.89
CNGA1P29973 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.6■□□□□ 0.89
CNGA1P29973 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNGA1P29973 AC087289.5-201ENST00000586076 3175 ntBASIC20.6■□□□□ 0.89
CNGA1P29973 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms