Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG5O95196 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG5O95196 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.47■□□□□ 0.71
CSPG5O95196 AC018712.1-201ENST00000455767 687 ntBASIC19.47■□□□□ 0.71
CSPG5O95196 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG5O95196 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CSPG5O95196 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG5O95196 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG5O95196 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.47■□□□□ 0.71
CSPG5O95196 AL691403.2-201ENST00000618460 490 ntBASIC19.47■□□□□ 0.71
CSPG5O95196 AC116407.3-201ENST00000623905 1129 ntBASIC19.47■□□□□ 0.71
CSPG5O95196 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG5O95196 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG5O95196 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG5O95196 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG5O95196 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.47■□□□□ 0.71
CSPG5O95196 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSPG5O95196 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.47■□□□□ 0.71
CSPG5O95196 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG5O95196 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG5O95196 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.46■□□□□ 0.71
CSPG5O95196 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CSPG5O95196 ZNF259P1-201ENST00000407656 1365 ntBASIC19.46■□□□□ 0.71
CSPG5O95196 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG5O95196 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CSPG5O95196 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG5O95196 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG5O95196 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.46■□□□□ 0.71
CSPG5O95196 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG5O95196 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG5O95196 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG5O95196 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.46■□□□□ 0.71
CSPG5O95196 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.46■□□□□ 0.71
CSPG5O95196 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.46■□□□□ 0.71
CSPG5O95196 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.46■□□□□ 0.71
CSPG5O95196 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.46■□□□□ 0.71
CSPG5O95196 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CSPG5O95196 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG5O95196 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSPG5O95196 AC141586.3-201ENST00000562166 1838 ntBASIC19.46■□□□□ 0.71
CSPG5O95196 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CSPG5O95196 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.7
CSPG5O95196 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.45■□□□□ 0.7
CSPG5O95196 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CSPG5O95196 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 AC104109.2-201ENST00000602919 1418 ntBASIC19.45■□□□□ 0.7
CSPG5O95196 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CSPG5O95196 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.45■□□□□ 0.7
CSPG5O95196 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.45■□□□□ 0.7
CSPG5O95196 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.45■□□□□ 0.7
CSPG5O95196 FAM220CP-201ENST00000395253 831 ntBASIC19.45■□□□□ 0.7
CSPG5O95196 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CSPG5O95196 RPS8P6-201ENST00000426177 609 ntBASIC19.45■□□□□ 0.7
CSPG5O95196 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CSPG5O95196 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.45■□□□□ 0.7
CSPG5O95196 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.45■□□□□ 0.7
CSPG5O95196 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 AP001269.4-201ENST00000609611 512 ntBASIC19.45■□□□□ 0.7
CSPG5O95196 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CSPG5O95196 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CSPG5O95196 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CSPG5O95196 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.45■□□□□ 0.7
CSPG5O95196 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSPG5O95196 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.45■□□□□ 0.7
CSPG5O95196 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CSPG5O95196 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CSPG5O95196 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 TP73-AS1-210ENST00000637775 1455 ntBASIC19.44■□□□□ 0.7
CSPG5O95196 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CSPG5O95196 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 FGFR3P6-201ENST00000457012 610 ntBASIC19.44■□□□□ 0.7
CSPG5O95196 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.44■□□□□ 0.7
CSPG5O95196 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.44■□□□□ 0.7
CSPG5O95196 AC005336.2-201ENST00000593183 939 ntBASIC19.44■□□□□ 0.7
CSPG5O95196 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.44■□□□□ 0.7
CSPG5O95196 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSPG5O95196 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms