Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TMEM256-PLSCR3K7ERE1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
TMEM256-PLSCR3K7ERE1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TMEM256-PLSCR3K7ERE1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TMEM256-PLSCR3K7ERE1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TMEM256-PLSCR3K7ERE1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
TMEM256-PLSCR3K7ERE1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TMEM256-PLSCR3K7ERE1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 RCC2P6-201ENST00000526625 1557 ntBASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AL138688.1-201ENST00000624851 1594 ntBASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 PCDH8P1-201ENST00000428983 2773 ntBASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 YBX1P10-201ENST00000444752 975 ntBASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 TERF1P5-201ENST00000477545 1207 ntBASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AC068587.9-201ENST00000641814 219 ntBASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TMEM256-PLSCR3K7ERE1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms