Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
USP16Q9Y5T5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
USP16Q9Y5T5 AC132938.6-201ENST00000623828 1655 ntBASIC23.13■■□□□ 1.29
USP16Q9Y5T5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 AC112698.1-201ENST00000510299 916 ntBASIC23.12■■□□□ 1.29
USP16Q9Y5T5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 AC023511.2-201ENST00000618803 211 ntBASIC23.12■■□□□ 1.29
USP16Q9Y5T5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 AC243591.1-201ENST00000452967 1364 ntBASIC23.12■■□□□ 1.29
USP16Q9Y5T5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
USP16Q9Y5T5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.11■■□□□ 1.29
USP16Q9Y5T5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 PAN3-AS1-201ENST00000563843 1351 ntBASIC23.11■■□□□ 1.29
USP16Q9Y5T5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC23.11■■□□□ 1.29
USP16Q9Y5T5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 AP005117.1-201ENST00000584346 1413 ntBASIC23.1■■□□□ 1.29
USP16Q9Y5T5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 MIR574-201ENST00000385209 96 ntBASIC23.1■■□□□ 1.29
USP16Q9Y5T5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 AF186996.4-201ENST00000467186 377 ntBASIC23.1■■□□□ 1.29
USP16Q9Y5T5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.1■■□□□ 1.29
USP16Q9Y5T5 ESPNP-201ENST00000270691 2015 ntBASIC23.09■■□□□ 1.29
USP16Q9Y5T5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 MIR7706-201ENST00000613747 67 ntBASIC23.09■■□□□ 1.29
USP16Q9Y5T5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.09■■□□□ 1.29
USP16Q9Y5T5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 RBM17P3-201ENST00000417687 1192 ntBASIC23.08■■□□□ 1.29
USP16Q9Y5T5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.08■■□□□ 1.29
USP16Q9Y5T5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms