Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDE1Q9NXR1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 AC060766.5-201ENST00000590539 871 ntBASIC17.62■□□□□ 0.41
NDE1Q9NXR1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 AC004264.1-201ENST00000608354 794 ntBASIC17.62■□□□□ 0.41
NDE1Q9NXR1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDE1Q9NXR1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 MIPEPP3-201ENST00000412105 444 ntBASIC17.61■□□□□ 0.41
NDE1Q9NXR1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.61■□□□□ 0.41
NDE1Q9NXR1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 AC087623.3-201ENST00000607047 1098 ntBASIC17.61■□□□□ 0.41
NDE1Q9NXR1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 KRT8P11-201ENST00000409686 1436 ntBASIC17.61■□□□□ 0.41
NDE1Q9NXR1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 RCC2P3-201ENST00000418112 1537 ntBASIC17.61■□□□□ 0.41
NDE1Q9NXR1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.61■□□□□ 0.41
NDE1Q9NXR1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms