Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 AL390961.4-201ENST00000623958 2535 ntBASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM9Q9NQV7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 AC116407.4-201ENST00000623319 1061 ntBASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM9Q9NQV7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 DUTP2-201ENST00000519164 463 ntBASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 AC099343.3-201ENST00000605834 2503 ntBASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PRDM9Q9NQV7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 AP003733.1-201ENST00000491725 852 ntBASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms