Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL390955.2-201ENST00000603032 514 ntBASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 PCDHAC2-203ENST00000615316 3011 ntBASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 AP005018.1-201ENST00000525475 301 ntBASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 AC093520.2-201ENST00000561830 333 ntBASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 MTDHP4-201ENST00000600287 670 ntBASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTNAP3Q9BZ76 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CNTNAP3Q9BZ76 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3Q9BZ76 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTNAP3Q9BZ76 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3Q9BZ76 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3Q9BZ76 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTNAP3Q9BZ76 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP3Q9BZ76 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTNAP3Q9BZ76 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.27■□□□□ 0.35
CNTNAP3Q9BZ76 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.27■□□□□ 0.35
CNTNAP3Q9BZ76 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 AP002414.1-201ENST00000391405 1147 ntBASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 AC108751.1-201ENST00000490852 363 ntBASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 AP000344.2-201ENST00000512987 629 ntBASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 RN7SL204P-201ENST00000582831 262 ntBASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP3Q9BZ76 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 FAM86GP-201ENST00000448322 971 ntBASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 PDPK2P-202ENST00000562415 1191 ntBASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms