Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX5Q8N196 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.58■□□□□ 0.56
SIX5Q8N196 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX5Q8N196 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SIX5Q8N196 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.57■□□□□ 0.56
SIX5Q8N196 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.57■□□□□ 0.56
SIX5Q8N196 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.57■□□□□ 0.56
SIX5Q8N196 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SIX5Q8N196 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.57■□□□□ 0.56
SIX5Q8N196 ABCD1P5-201ENST00000445663 754 ntBASIC18.57■□□□□ 0.56
SIX5Q8N196 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.57■□□□□ 0.56
SIX5Q8N196 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.57■□□□□ 0.56
SIX5Q8N196 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SIX5Q8N196 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.57■□□□□ 0.56
SIX5Q8N196 AC008735.5-201ENST00000623544 497 ntBASIC18.57■□□□□ 0.56
SIX5Q8N196 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 AL163051.1-201ENST00000569214 1512 ntBASIC18.57■□□□□ 0.56
SIX5Q8N196 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.57■□□□□ 0.56
SIX5Q8N196 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SIX5Q8N196 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SIX5Q8N196 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
SIX5Q8N196 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.57■□□□□ 0.56
SIX5Q8N196 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SIX5Q8N196 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX5Q8N196 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SIX5Q8N196 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SIX5Q8N196 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
SIX5Q8N196 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SIX5Q8N196 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SIX5Q8N196 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.56■□□□□ 0.56
SIX5Q8N196 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.56■□□□□ 0.56
SIX5Q8N196 AC007967.2-201ENST00000432613 625 ntBASIC18.56■□□□□ 0.56
SIX5Q8N196 AC113404.2-201ENST00000507884 177 ntBASIC18.56■□□□□ 0.56
SIX5Q8N196 AC002347.1-201ENST00000569543 541 ntBASIC18.56■□□□□ 0.56
SIX5Q8N196 AC025062.2-201ENST00000605477 670 ntBASIC18.56■□□□□ 0.56
SIX5Q8N196 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SIX5Q8N196 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.56■□□□□ 0.56
SIX5Q8N196 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIX5Q8N196 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.56■□□□□ 0.56
SIX5Q8N196 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 AC087289.5-201ENST00000586076 3175 ntBASIC18.55■□□□□ 0.56
SIX5Q8N196 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.55■□□□□ 0.56
SIX5Q8N196 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SIX5Q8N196 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.55■□□□□ 0.56
SIX5Q8N196 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 AC004832.2-201ENST00000426397 482 ntBASIC18.55■□□□□ 0.56
SIX5Q8N196 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.55■□□□□ 0.56
SIX5Q8N196 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.55■□□□□ 0.56
SIX5Q8N196 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.55■□□□□ 0.56
SIX5Q8N196 AC008687.5-201ENST00000593746 558 ntBASIC18.55■□□□□ 0.56
SIX5Q8N196 AC011467.2-201ENST00000598425 242 ntBASIC18.55■□□□□ 0.56
SIX5Q8N196 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.55■□□□□ 0.56
SIX5Q8N196 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.55■□□□□ 0.56
SIX5Q8N196 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.55■□□□□ 0.56
SIX5Q8N196 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SIX5Q8N196 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.55■□□□□ 0.56
SIX5Q8N196 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIX5Q8N196 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms