Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 KRT18P29-201ENST00000397031 1267 ntBASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 PRORSD1P-201ENST00000295112 541 ntBASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 UBE2SP1-201ENST00000450587 669 ntBASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 FZD10-202ENST00000539839 3282 ntBASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIF1Q5T3J3 AC092338.2-201ENST00000568827 1415 ntBASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 AC141586.5-201ENST00000624546 2050 ntBASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 AL355355.2-201ENST00000442321 338 ntBASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 AC142381.4-202ENST00000563973 229 ntBASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 AC026471.5-201ENST00000615068 467 ntBASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 AC112497.1-201ENST00000624824 639 ntBASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIF1Q5T3J3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms