Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 AP000593.1-201ENST00000393668 712 ntBASIC19.36■□□□□ 0.69
SSR1P43307 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SSR1P43307 SLC25A1P2-201ENST00000430693 912 ntBASIC19.36■□□□□ 0.69
SSR1P43307 CCR12P-201ENST00000446203 998 ntBASIC19.36■□□□□ 0.69
SSR1P43307 AL355075.4-201ENST00000554988 638 ntBASIC19.36■□□□□ 0.69
SSR1P43307 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.36■□□□□ 0.69
SSR1P43307 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.36■□□□□ 0.69
SSR1P43307 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR1P43307 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SSR1P43307 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
SSR1P43307 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR1P43307 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR1P43307 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR1P43307 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR1P43307 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSR1P43307 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.35■□□□□ 0.69
SSR1P43307 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.35■□□□□ 0.69
SSR1P43307 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SSR1P43307 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.35■□□□□ 0.69
SSR1P43307 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR1P43307 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR1P43307 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.35■□□□□ 0.69
SSR1P43307 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR1P43307 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SSR1P43307 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.35■□□□□ 0.69
SSR1P43307 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.35■□□□□ 0.69
SSR1P43307 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.35■□□□□ 0.69
SSR1P43307 TSPY17P-201ENST00000450329 467 ntBASIC19.35■□□□□ 0.69
SSR1P43307 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.35■□□□□ 0.69
SSR1P43307 KRT18P41-201ENST00000518924 1277 ntBASIC19.35■□□□□ 0.69
SSR1P43307 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.35■□□□□ 0.69
SSR1P43307 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SSR1P43307 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR1P43307 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR1P43307 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SSR1P43307 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.35■□□□□ 0.69
SSR1P43307 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR1P43307 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSR1P43307 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSR1P43307 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
SSR1P43307 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SSR1P43307 KRT8P50-201ENST00000562022 1438 ntBASIC19.34■□□□□ 0.69
SSR1P43307 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR1P43307 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.34■□□□□ 0.69
SSR1P43307 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SSR1P43307 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR1P43307 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR1P43307 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SSR1P43307 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR1P43307 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SSR1P43307 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR1P43307 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.34■□□□□ 0.69
SSR1P43307 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR1P43307 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.34■□□□□ 0.69
SSR1P43307 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.34■□□□□ 0.69
SSR1P43307 FITM1-202ENST00000559294 800 ntBASIC19.34■□□□□ 0.69
SSR1P43307 C2orf69P3-201ENST00000565542 1120 ntBASIC19.34■□□□□ 0.69
SSR1P43307 AL353719.1-201ENST00000566847 864 ntBASIC19.34■□□□□ 0.69
SSR1P43307 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.34■□□□□ 0.69
SSR1P43307 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SSR1P43307 AC116562.4-202ENST00000641738 218 ntBASIC19.34■□□□□ 0.69
SSR1P43307 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR1P43307 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR1P43307 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SSR1P43307 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR1P43307 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR1P43307 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SSR1P43307 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SSR1P43307 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSR1P43307 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR1P43307 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.33■□□□□ 0.69
SSR1P43307 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR1P43307 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.33■□□□□ 0.69
SSR1P43307 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR1P43307 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSR1P43307 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SSR1P43307 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSR1P43307 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR1P43307 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.33■□□□□ 0.69
SSR1P43307 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR1P43307 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.33■□□□□ 0.69
SSR1P43307 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.33■□□□□ 0.68
SSR1P43307 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.33■□□□□ 0.68
SSR1P43307 BX088651.1-201ENST00000540551 451 ntBASIC19.33■□□□□ 0.68
SSR1P43307 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR1P43307 AL023803.3-201ENST00000615559 522 ntBASIC19.33■□□□□ 0.68
SSR1P43307 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR1P43307 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR1P43307 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.33■□□□□ 0.68
SSR1P43307 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR1P43307 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SSR1P43307 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms