Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 AC138028.4-201ENST00000564984 1845 ntBASIC16.96■□□□□ 0.3
SOX30O94993 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SOX30O94993 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SOX30O94993 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SOX30O94993 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SOX30O94993 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.95■□□□□ 0.3
SOX30O94993 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SOX30O94993 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
SOX30O94993 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.95■□□□□ 0.3
SOX30O94993 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.95■□□□□ 0.3
SOX30O94993 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX30O94993 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SOX30O94993 AP000997.3-201ENST00000623333 2250 ntBASIC16.95■□□□□ 0.3
SOX30O94993 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SOX30O94993 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SOX30O94993 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX30O94993 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SOX30O94993 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
SOX30O94993 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SOX30O94993 NOC2LP1-202ENST00000452600 2235 ntBASIC16.94■□□□□ 0.3
SOX30O94993 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX30O94993 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 KRT89P-201ENST00000620027 1478 ntBASIC16.94■□□□□ 0.3
SOX30O94993 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX30O94993 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SOX30O94993 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX30O94993 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
SOX30O94993 BX664615.1-201ENST00000443558 458 ntBASIC16.94■□□□□ 0.3
SOX30O94993 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SOX30O94993 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX30O94993 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX30O94993 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX30O94993 AC005363.2-201ENST00000618631 242 ntBASIC16.94■□□□□ 0.3
SOX30O94993 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SOX30O94993 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SOX30O94993 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX30O94993 PHGDH-209ENST00000641074 1780 ntBASIC16.94■□□□□ 0.3
SOX30O94993 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX30O94993 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX30O94993 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX30O94993 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SOX30O94993 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SOX30O94993 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SOX30O94993 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.93■□□□□ 0.3
SOX30O94993 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SOX30O94993 AC093010.1-201ENST00000473625 1624 ntBASIC16.93■□□□□ 0.3
SOX30O94993 AC113404.2-201ENST00000507884 177 ntBASIC16.93■□□□□ 0.3
SOX30O94993 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.93■□□□□ 0.3
SOX30O94993 DUTP2-201ENST00000519164 463 ntBASIC16.93■□□□□ 0.3
SOX30O94993 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.93■□□□□ 0.3
SOX30O94993 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SOX30O94993 NOC2LP2-201ENST00000407594 1944 ntBASIC16.93■□□□□ 0.3
SOX30O94993 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX30O94993 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX30O94993 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX30O94993 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX30O94993 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX30O94993 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX30O94993 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX30O94993 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX30O94993 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms