Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.28■□□□□ 0.2
PFDN1O60925 DUX4L18-201ENST00000553347 1267 ntBASIC16.28■□□□□ 0.2
PFDN1O60925 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PFDN1O60925 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.28■□□□□ 0.2
PFDN1O60925 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PFDN1O60925 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.28■□□□□ 0.2
PFDN1O60925 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.28■□□□□ 0.2
PFDN1O60925 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 FLJ13224-201ENST00000313737 1514 ntBASIC16.28■□□□□ 0.2
PFDN1O60925 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PFDN1O60925 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PFDN1O60925 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PFDN1O60925 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.28■□□□□ 0.2
PFDN1O60925 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.28■□□□□ 0.2
PFDN1O60925 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.28■□□□□ 0.2
PFDN1O60925 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 AC079328.2-201ENST00000561241 3354 ntBASIC16.27■□□□□ 0.2
PFDN1O60925 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.27■□□□□ 0.2
PFDN1O60925 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.27■□□□□ 0.2
PFDN1O60925 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PFDN1O60925 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PFDN1O60925 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PFDN1O60925 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.27■□□□□ 0.2
PFDN1O60925 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.27■□□□□ 0.2
PFDN1O60925 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PFDN1O60925 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN1O60925 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN1O60925 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN1O60925 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN1O60925 AC104581.4-201ENST00000623126 3052 ntBASIC16.27■□□□□ 0.19
PFDN1O60925 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.27■□□□□ 0.19
PFDN1O60925 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN1O60925 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN1O60925 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PFDN1O60925 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
PFDN1O60925 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PFDN1O60925 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN1O60925 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PFDN1O60925 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 MIR4449-201ENST00000578365 66 ntBASIC16.26■□□□□ 0.19
PFDN1O60925 AC137630.3-201ENST00000607245 391 ntBASIC16.26■□□□□ 0.19
PFDN1O60925 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
PFDN1O60925 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN1O60925 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PFDN1O60925 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN1O60925 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN1O60925 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.26■□□□□ 0.19
PFDN1O60925 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PFDN1O60925 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PFDN1O60925 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms