Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 FAM197Y8-203ENST00000450145 560 ntBASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 BNIP3P18-201ENST00000593976 575 ntBASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 AL591684.3-201ENST00000605187 298 ntBASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 AF228730.7-201ENST00000641842 219 ntBASIC18.02■□□□□ 0.48
SNX11Q9Y5W9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX11Q9Y5W9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SNX11Q9Y5W9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SNX11Q9Y5W9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX11Q9Y5W9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX11Q9Y5W9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 RNA5SP419-201ENST00000515908 135 ntBASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 MIR5100-201ENST00000579544 119 ntBASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 AL163051.1-201ENST00000569214 1512 ntBASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX11Q9Y5W9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 IL9RP2-201ENST00000423948 1312 ntBASIC18■□□□□ 0.47
SNX11Q9Y5W9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 NFYC-AS1-201ENST00000606277 1687 ntBASIC18■□□□□ 0.47
SNX11Q9Y5W9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX11Q9Y5W9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNX11Q9Y5W9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 AL773604.1-201ENST00000617417 272 ntBASIC18■□□□□ 0.47
SNX11Q9Y5W9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SNX11Q9Y5W9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SNX11Q9Y5W9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SNX11Q9Y5W9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SNX11Q9Y5W9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 MTMR9LP-203ENST00000426597 1545 ntBASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 AC096582.2-201ENST00000510860 516 ntBASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNX11Q9Y5W9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms