Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 IGHV3-47-201ENST00000425060 335 ntBASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDP1Q9Y5B0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 AC113404.2-201ENST00000507884 177 ntBASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 KRT8P10-201ENST00000450021 1447 ntBASIC21.04■□□□□ 0.96
CTDP1Q9Y5B0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 KRT16P4-201ENST00000453883 522 ntBASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTDP1Q9Y5B0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 SDHAP2-201ENST00000455183 2001 ntBASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTDP1Q9Y5B0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CTDP1Q9Y5B0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTDP1Q9Y5B0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTDP1Q9Y5B0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CTDP1Q9Y5B0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CTDP1Q9Y5B0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms