Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 KRT18P5-201ENST00000436075 1291 ntBASIC17.24■□□□□ 0.35
AP4S1Q9Y587 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 AC105036.2-201ENST00000569468 176 ntBASIC17.24■□□□□ 0.35
AP4S1Q9Y587 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 RCC2P3-201ENST00000418112 1537 ntBASIC17.23■□□□□ 0.35
AP4S1Q9Y587 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 AF201337.1-201ENST00000520239 748 ntBASIC17.23■□□□□ 0.35
AP4S1Q9Y587 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 C1QL1P1-201ENST00000568105 661 ntBASIC17.23■□□□□ 0.35
AP4S1Q9Y587 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4S1Q9Y587 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
AP4S1Q9Y587 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms