Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.89■□□□□ 0.94
USP25Q9UHP3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP25Q9UHP3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
USP25Q9UHP3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.89■□□□□ 0.93
USP25Q9UHP3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
USP25Q9UHP3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP25Q9UHP3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP25Q9UHP3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.89■□□□□ 0.93
USP25Q9UHP3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP25Q9UHP3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP25Q9UHP3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.89■□□□□ 0.93
USP25Q9UHP3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.89■□□□□ 0.93
USP25Q9UHP3 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.89■□□□□ 0.93
USP25Q9UHP3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP25Q9UHP3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP25Q9UHP3 PP12613-201ENST00000424958 2230 ntBASIC20.89■□□□□ 0.93
USP25Q9UHP3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP25Q9UHP3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.89■□□□□ 0.93
USP25Q9UHP3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP25Q9UHP3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USP25Q9UHP3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 REXO1L10P-201ENST00000615707 1290 ntBASIC20.88■□□□□ 0.93
USP25Q9UHP3 REXO1L12P-201ENST00000622156 912 ntBASIC20.88■□□□□ 0.93
USP25Q9UHP3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 GPAT2P1-201ENST00000444924 1672 ntBASIC20.88■□□□□ 0.93
USP25Q9UHP3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.88■□□□□ 0.93
USP25Q9UHP3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP25Q9UHP3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP25Q9UHP3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP25Q9UHP3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP25Q9UHP3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP25Q9UHP3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP25Q9UHP3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP25Q9UHP3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP25Q9UHP3 AC034236.2-201ENST00000606662 1610 ntBASIC20.87■□□□□ 0.93
USP25Q9UHP3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP25Q9UHP3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP25Q9UHP3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP25Q9UHP3 AL355355.2-201ENST00000442321 338 ntBASIC20.87■□□□□ 0.93
USP25Q9UHP3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 AP005242.2-201ENST00000580065 1175 ntBASIC20.87■□□□□ 0.93
USP25Q9UHP3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
USP25Q9UHP3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.86■□□□□ 0.93
USP25Q9UHP3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP25Q9UHP3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms