Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 AC009237.14-201ENST00000609975 1594 ntBASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 ADAMTS7P1-201ENST00000613213 4793 ntBASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 AL031258.1-201ENST00000623562 325 ntBASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC9.32□□□□□ -0.92
CDC42SE1Q9NRR8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42SE1Q9NRR8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms