Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 AC073111.5-205ENST00000641717 521 ntBASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 AC133963.1-201ENST00000504166 1679 ntBASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 OR6D1P-202ENST00000641007 5290 ntBASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 SDHAP2-201ENST00000455183 2001 ntBASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CKAP2Q8WWK9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CKAP2Q8WWK9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
CKAP2Q8WWK9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CKAP2Q8WWK9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
CKAP2Q8WWK9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CKAP2Q8WWK9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CKAP2Q8WWK9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
CKAP2Q8WWK9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CKAP2Q8WWK9 MIR663A-201ENST00000385250 93 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms