Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 AC104109.2-201ENST00000602919 1418 ntBASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 RPSAP43-201ENST00000402237 625 ntBASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 AC145285.3-201ENST00000564603 959 ntBASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 MTDHP3-201ENST00000594186 672 ntBASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 AL356488.2-201ENST00000602755 427 ntBASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRABD2BA6NFA1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AC006333.2-201ENST00000607957 2099 ntBASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AC034236.2-201ENST00000606662 1610 ntBASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 FGFR3P6-201ENST00000457012 610 ntBASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 FAM197Y3-203ENST00000618346 717 ntBASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AC083906.6-201ENST00000641366 219 ntBASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AC079781.4-201ENST00000641908 219 ntBASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 KRT89P-201ENST00000620027 1478 ntBASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.48■□□□□ 0.39
TRABD2BA6NFA1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRABD2BA6NFA1 MED15P5-201ENST00000423150 992 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms