Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 GPR32P1-201ENST00000601788 811 ntBASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 AL390719.2-201ENST00000606993 987 ntBASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC092119.3-201ENST00000612618 583 ntBASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 SDHAP2-201ENST00000455183 2001 ntBASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC005082.1-201ENST00000413042 2259 ntBASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC016734.2-201ENST00000624325 1377 ntBASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV4-28A0A0C4DH34 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 CROCCP3-202ENST00000420820 1947 ntBASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 IGHGP-201ENST00000390555 1178 ntBASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 CHCHD2P8-201ENST00000429873 447 ntBASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 ATP5G2P1-201ENST00000433580 426 ntBASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 KRT18P56-201ENST00000507275 550 ntBASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 AC008687.5-201ENST00000593746 558 ntBASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
IGHV4-28A0A0C4DH34 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
IGHV4-28A0A0C4DH34 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.15□□□□□ -0.31
IGHV4-28A0A0C4DH34 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms