Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 SDHAP2-201ENST00000455183 2001 ntBASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP2BQ9UQN3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 PRORSD1P-201ENST00000295112 541 ntBASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP2BQ9UQN3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2BQ9UQN3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2BQ9UQN3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2BQ9UQN3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CHMP2BQ9UQN3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.58■□□□□ 0.57
CHMP2BQ9UQN3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2BQ9UQN3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2BQ9UQN3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.58■□□□□ 0.57
CHMP2BQ9UQN3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.58■□□□□ 0.57
CHMP2BQ9UQN3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP2BQ9UQN3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 CA15P1-201ENST00000481698 905 ntBASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 AC142381.4-202ENST00000563973 229 ntBASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 REXO1L10P-201ENST00000615707 1290 ntBASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 REXO1L12P-201ENST00000622156 912 ntBASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 AC113410.3-201ENST00000623366 203 ntBASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 AL163051.1-201ENST00000569214 1512 ntBASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP2BQ9UQN3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 AC012317.2-201ENST00000623305 2251 ntBASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 AC009102.3-201ENST00000623118 1491 ntBASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP2BQ9UQN3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2BQ9UQN3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms