Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC009154.2-201ENST00000621177 724 ntBASIC16.86■□□□□ 0.29
CHD8Q9HCK8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 PRYP5-201ENST00000451909 266 ntBASIC16.86■□□□□ 0.29
CHD8Q9HCK8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 AL662799.1-202ENST00000614205 422 ntBASIC16.86■□□□□ 0.29
CHD8Q9HCK8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHD8Q9HCK8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 ELK2AP-201ENST00000392510 1007 ntBASIC16.85■□□□□ 0.29
CHD8Q9HCK8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 AC010654.1-201ENST00000615722 808 ntBASIC16.85■□□□□ 0.29
CHD8Q9HCK8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 AL121761.2-201ENST00000598007 1648 ntBASIC16.85■□□□□ 0.29
CHD8Q9HCK8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHD8Q9HCK8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 MIR943-201ENST00000401286 94 ntBASIC16.84■□□□□ 0.29
CHD8Q9HCK8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 MIR6805-201ENST00000615055 62 ntBASIC16.84■□□□□ 0.29
CHD8Q9HCK8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 AC026310.3-201ENST00000625186 2373 ntBASIC16.84■□□□□ 0.29
CHD8Q9HCK8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 BASP1P1-201ENST00000430708 665 ntBASIC16.84■□□□□ 0.29
CHD8Q9HCK8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CHD8Q9HCK8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.83■□□□□ 0.29
CHD8Q9HCK8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CHD8Q9HCK8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CHD8Q9HCK8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHD8Q9HCK8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms